From 70d234a43866616c2ed20858995986983b060283 Mon Sep 17 00:00:00 2001
From: Katelyn FitzGerald <7872563+kafitzgerald@users.noreply.github.com>
Date: Thu, 13 Jun 2024 15:27:50 -0600
Subject: [PATCH 01/18] new config and action

---
 .github/workflows/deploy.yml                  | 47 +++++++++++++++++++
 .github/workflows/nightly-build.yaml          | 17 -------
 .github/workflows/publish-book.yaml           | 19 --------
 .github/workflows/trigger-book-build.yaml     | 11 -----
 .github/workflows/trigger-delete-preview.yaml |  9 ----
 .github/workflows/trigger-link-check.yaml     |  7 ---
 .github/workflows/trigger-preview.yaml        | 27 -----------
 .github/workflows/trigger-replace-links.yaml  | 31 ------------
 myst.yml                                      | 32 +++++++++++++
 9 files changed, 79 insertions(+), 121 deletions(-)
 create mode 100644 .github/workflows/deploy.yml
 delete mode 100644 .github/workflows/nightly-build.yaml
 delete mode 100644 .github/workflows/publish-book.yaml
 delete mode 100644 .github/workflows/trigger-book-build.yaml
 delete mode 100644 .github/workflows/trigger-delete-preview.yaml
 delete mode 100644 .github/workflows/trigger-link-check.yaml
 delete mode 100644 .github/workflows/trigger-preview.yaml
 delete mode 100644 .github/workflows/trigger-replace-links.yaml
 create mode 100644 myst.yml

diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
new file mode 100644
index 00000000..b85a12e9
--- /dev/null
+++ b/.github/workflows/deploy.yml
@@ -0,0 +1,47 @@
+# This file was created automatically with `myst init --gh-pages` 🪄 💚
+
+name: MyST GitHub Pages Deploy
+on:
+  workflow:
+  push:
+    # Runs on pushes targeting the default branch
+    branches: [main]
+env:
+  # `BASE_URL` determines the website is served from, including CSS & JS assets
+  # You may need to change this to `BASE_URL: ''`
+  BASE_URL: /${{ github.event.repository.name }}
+
+# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+# Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued.
+# However, do NOT cancel in-progress runs as we want to allow these production deployments to complete.
+concurrency:
+  group: 'pages'
+  cancel-in-progress: false
+jobs:
+  deploy:
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Setup Pages
+        uses: actions/configure-pages@v3
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 18.x
+      - name: Install MyST Markdown
+        run: npm install -g mystmd
+      - name: Build HTML Assets
+        run: myst build --html
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v1
+        with:
+          path: './_build/html'
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v2
diff --git a/.github/workflows/nightly-build.yaml b/.github/workflows/nightly-build.yaml
deleted file mode 100644
index 7af78771..00000000
--- a/.github/workflows/nightly-build.yaml
+++ /dev/null
@@ -1,17 +0,0 @@
-name: nightly-build
-
-on:
-  workflow_dispatch:
-  schedule:
-    - cron: "0 0 * * *" # Daily “At 00:00”
-
-jobs:
-  build:
-    if: ${{ github.repository_owner == 'ProjectPythia' }}
-    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
-    with:
-      environment_name: cookbook-dev
-
-  link-check:
-    if: ${{ github.repository_owner == 'ProjectPythia' }}
-    uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main
diff --git a/.github/workflows/publish-book.yaml b/.github/workflows/publish-book.yaml
deleted file mode 100644
index 94f4e48a..00000000
--- a/.github/workflows/publish-book.yaml
+++ /dev/null
@@ -1,19 +0,0 @@
-name: publish-book
-
-on:
-  # Trigger the workflow on push to main branch
-  push:
-    branches:
-      - main
-  workflow_dispatch:
-
-jobs:
-  build:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
-    with:
-      use_cached_environment: false
-      environment_name: unstructured-grid-viz-cookbook-dev
-
-  deploy:
-    needs: build
-    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
diff --git a/.github/workflows/trigger-book-build.yaml b/.github/workflows/trigger-book-build.yaml
deleted file mode 100644
index bd014bf8..00000000
--- a/.github/workflows/trigger-book-build.yaml
+++ /dev/null
@@ -1,11 +0,0 @@
-name: trigger-book-build
-on:
-  pull_request:
-
-jobs:
-  build:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
-    with:
-      environment_name: cookbook-dev
-      artifact_name: book-zip-${{ github.event.number }}
-      # Other input options are possible, see ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml
diff --git a/.github/workflows/trigger-delete-preview.yaml b/.github/workflows/trigger-delete-preview.yaml
deleted file mode 100644
index 06e13e5c..00000000
--- a/.github/workflows/trigger-delete-preview.yaml
+++ /dev/null
@@ -1,9 +0,0 @@
-name: trigger-delete-preview
-
-on:
-  pull_request_target:
-    types: closed
-
-jobs:
-  delete:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/delete-preview.yaml@main
diff --git a/.github/workflows/trigger-link-check.yaml b/.github/workflows/trigger-link-check.yaml
deleted file mode 100644
index e2402ddc..00000000
--- a/.github/workflows/trigger-link-check.yaml
+++ /dev/null
@@ -1,7 +0,0 @@
-name: trigger-link-check
-on:
-  pull_request:
-
-jobs:
-  link-check:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main
diff --git a/.github/workflows/trigger-preview.yaml b/.github/workflows/trigger-preview.yaml
deleted file mode 100644
index 049b5d0b..00000000
--- a/.github/workflows/trigger-preview.yaml
+++ /dev/null
@@ -1,27 +0,0 @@
-name: trigger-preview
-on:
-  workflow_run:
-    workflows:
-      - trigger-book-build
-    types:
-      - requested
-      - completed
-
-jobs:
-  find-pull-request:
-    uses: ProjectPythia/cookbook-actions/.github/workflows/find-pull-request.yaml@main
-  deploy-preview:
-    needs: find-pull-request
-    if: github.event.workflow_run.conclusion == 'success'
-    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
-    with:
-      artifact_name: book-zip-${{ needs.find-pull-request.outputs.number }}
-      destination_dir: _preview/${{ needs.find-pull-request.outputs.number }} # deploy to subdirectory labeled with PR number
-      is_preview: "true"
-
-  preview-comment:
-    needs: find-pull-request
-    uses: ProjectPythia/cookbook-actions/.github/workflows/preview-comment.yaml@main
-    with:
-      pull_request_number: ${{ needs.find-pull-request.outputs.number }}
-      sha: ${{ needs.find-pull-request.outputs.sha }}
diff --git a/.github/workflows/trigger-replace-links.yaml b/.github/workflows/trigger-replace-links.yaml
deleted file mode 100644
index 1d1e8547..00000000
--- a/.github/workflows/trigger-replace-links.yaml
+++ /dev/null
@@ -1,31 +0,0 @@
-name: trigger-replace-links
-
-on:
-  workflow_dispatch:
-
-jobs:
-  build:
-    runs-on: ubuntu-latest
-    permissions:
-      contents: write
-
-    steps:
-      - uses: actions/checkout@v3
-      - name: Find and Replace Repository Name
-        uses: jacobtomlinson/gha-find-replace@v3
-        with:
-          find: "ProjectPythia/cookbook-template"
-          replace: "${{ github.repository_owner }}/${{ github.event.repository.name }}"
-          regex: false
-          exclude: ".github/workflows/trigger-replace-links.yaml"
-
-      - name: Find and Replace Repository ID
-        uses: jacobtomlinson/gha-find-replace@v3
-        with:
-          find: "475509405"
-          replace: "${{ github.repository_id}}"
-          regex: false
-          exclude: ".github/workflows/trigger-replace-links.yml"
-
-      - name: Push changes
-        uses: stefanzweifel/git-auto-commit-action@v4
diff --git a/myst.yml b/myst.yml
new file mode 100644
index 00000000..1f2998f2
--- /dev/null
+++ b/myst.yml
@@ -0,0 +1,32 @@
+version: 1
+extends:
+  - https://raw.githubusercontent.com/projectpythia-mystmd/pythia-config/main/pythia.yml
+project:
+  title: Unstructured Grids Visualization Cookbook
+  github: https://github.com/projectpythia-mystmd/unstructured-grid-viz-cookbook
+  authors:
+    - name: The Project Pythia Community
+  copyright: '2024'
+  toc:
+    - file: README.md
+    - title: Preamble
+      children:
+        - file: notebooks/how-to-cite.md
+    - title: Introduction to UXarray & Unstructured Grids
+      children:
+        - file: notebooks/01-intro/01-unstructured-grid-overview.ipynb
+        - file: notebooks/01-intro/02-data-structures.ipynb
+        - file: notebooks/01-intro/03-data-mapping.ipynb
+    - title: Methods & Libraries for Unstructured Grid Visualization
+      children:
+        - file: notebooks/02-methods/01-plotting-libraries.ipynb
+        - file: notebooks/02-methods/02-rendering-techniques.ipynb
+    - title: UXarray Visualization
+      children:
+      - file: notebooks/03-uxarray-vis/01-plot-api.ipynb
+      - file: notebooks/03-uxarray-vis/002-xarray-to-uxarray.ipynb
+      - file: notebooks/03-uxarray-vis/02-grid-topology.ipynb
+      - file: notebooks/03-uxarray-vis/03-polygons.ipynb
+      - file: notebooks/03-uxarray-vis/04-points.ipynb
+      - file: notebooks/03-uxarray-vis/07-animations.ipynb
+      - file: notebooks/03-uxarray-vis/06-performance.ipynb

From f25d5ec7c9ccf32bdb7208cc9319f17986595bb6 Mon Sep 17 00:00:00 2001
From: Katelyn FitzGerald <7872563+kafitzgerald@users.noreply.github.com>
Date: Thu, 13 Jun 2024 15:29:08 -0600
Subject: [PATCH 02/18] fix typo

---
 .github/workflows/deploy.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
index b85a12e9..783f68f0 100644
--- a/.github/workflows/deploy.yml
+++ b/.github/workflows/deploy.yml
@@ -2,7 +2,7 @@
 
 name: MyST GitHub Pages Deploy
 on:
-  workflow:
+  workflow_dispatch:
   push:
     # Runs on pushes targeting the default branch
     branches: [main]

From 7ccdb954c8bcccf7e83b2c5cf17cd71208046ea8 Mon Sep 17 00:00:00 2001
From: Katelyn FitzGerald <7872563+kafitzgerald@users.noreply.github.com>
Date: Thu, 13 Jun 2024 16:01:35 -0600
Subject: [PATCH 03/18] Update myst.yml

---
 myst.yml | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/myst.yml b/myst.yml
index 1f2998f2..1974aad2 100644
--- a/myst.yml
+++ b/myst.yml
@@ -30,3 +30,6 @@ project:
       - file: notebooks/03-uxarray-vis/04-points.ipynb
       - file: notebooks/03-uxarray-vis/07-animations.ipynb
       - file: notebooks/03-uxarray-vis/06-performance.ipynb
+  jupyter: 
+    binder:
+      repo: projectpythia-mystmd/advanced-viz-cookbook

From eabc7e5fcf2e4c44654d907102ffce2d89fbb29b Mon Sep 17 00:00:00 2001
From: Katelyn FitzGerald <7872563+kafitzgerald@users.noreply.github.com>
Date: Thu, 13 Jun 2024 16:18:32 -0600
Subject: [PATCH 04/18] Update environment.yml

---
 environment.yml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/environment.yml b/environment.yml
index 2b47c956..09344b21 100644
--- a/environment.yml
+++ b/environment.yml
@@ -11,6 +11,8 @@ dependencies:
   - jupyter-book
   - jupyterlab
   - matplotlib-base
+  - mystmd
+  - nodejs
   - netcdf4
   - numba
   - numpy

From 7bc9a83d57bd49af084cbf4057c1b5e92501a98e Mon Sep 17 00:00:00 2001
From: Katelyn FitzGerald <7872563+kafitzgerald@users.noreply.github.com>
Date: Thu, 13 Jun 2024 16:33:08 -0600
Subject: [PATCH 05/18] Update myst.yml

---
 myst.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/myst.yml b/myst.yml
index 1974aad2..66b525bb 100644
--- a/myst.yml
+++ b/myst.yml
@@ -32,4 +32,4 @@ project:
       - file: notebooks/03-uxarray-vis/06-performance.ipynb
   jupyter: 
     binder:
-      repo: projectpythia-mystmd/advanced-viz-cookbook
+      repo: projectpythia-mystmd/unstructured-grid-viz-cookbook

From 36ebcef0ad3c7da8a444d29462771086a3eecc01 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 11:31:15 -0600
Subject: [PATCH 06/18] Delete .github/workflows/deploy.yml

---
 .github/workflows/deploy.yml | 47 ------------------------------------
 1 file changed, 47 deletions(-)
 delete mode 100644 .github/workflows/deploy.yml

diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
deleted file mode 100644
index 783f68f0..00000000
--- a/.github/workflows/deploy.yml
+++ /dev/null
@@ -1,47 +0,0 @@
-# This file was created automatically with `myst init --gh-pages` 🪄 💚
-
-name: MyST GitHub Pages Deploy
-on:
-  workflow_dispatch:
-  push:
-    # Runs on pushes targeting the default branch
-    branches: [main]
-env:
-  # `BASE_URL` determines the website is served from, including CSS & JS assets
-  # You may need to change this to `BASE_URL: ''`
-  BASE_URL: /${{ github.event.repository.name }}
-
-# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
-permissions:
-  contents: read
-  pages: write
-  id-token: write
-# Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued.
-# However, do NOT cancel in-progress runs as we want to allow these production deployments to complete.
-concurrency:
-  group: 'pages'
-  cancel-in-progress: false
-jobs:
-  deploy:
-    environment:
-      name: github-pages
-      url: ${{ steps.deployment.outputs.page_url }}
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-      - name: Setup Pages
-        uses: actions/configure-pages@v3
-      - uses: actions/setup-node@v4
-        with:
-          node-version: 18.x
-      - name: Install MyST Markdown
-        run: npm install -g mystmd
-      - name: Build HTML Assets
-        run: myst build --html
-      - name: Upload artifact
-        uses: actions/upload-pages-artifact@v1
-        with:
-          path: './_build/html'
-      - name: Deploy to GitHub Pages
-        id: deployment
-        uses: actions/deploy-pages@v2

From 506c59981177bf96061ddfd0d4abb60e3647f856 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 11:32:41 -0600
Subject: [PATCH 07/18] Update myst.yml

---
 myst.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/myst.yml b/myst.yml
index 66b525bb..108436e1 100644
--- a/myst.yml
+++ b/myst.yml
@@ -1,9 +1,9 @@
 version: 1
 extends:
-  - https://raw.githubusercontent.com/projectpythia-mystmd/pythia-config/main/pythia.yml
+  - https://raw.githubusercontent.com/projectpythia/pythia-config/main/pythia.yml
 project:
   title: Unstructured Grids Visualization Cookbook
-  github: https://github.com/projectpythia-mystmd/unstructured-grid-viz-cookbook
+  github: https://github.com/projectpythia/unstructured-grid-viz-cookbook
   authors:
     - name: The Project Pythia Community
   copyright: '2024'
@@ -32,4 +32,4 @@ project:
       - file: notebooks/03-uxarray-vis/06-performance.ipynb
   jupyter: 
     binder:
-      repo: projectpythia-mystmd/unstructured-grid-viz-cookbook
+      repo: projectpythia/unstructured-grid-viz-cookbook

From bd6e990cc51968f9efad962d136bfb3545ee378a Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:29:41 -0600
Subject: [PATCH 08/18] Delete .isort.cfg

---
 .isort.cfg | 2 --
 1 file changed, 2 deletions(-)
 delete mode 100644 .isort.cfg

diff --git a/.isort.cfg b/.isort.cfg
deleted file mode 100644
index 0fc010f7..00000000
--- a/.isort.cfg
+++ /dev/null
@@ -1,2 +0,0 @@
-[settings]
-known_third_party =

From 67f129a1880ded854d7345d8af72f350e80f3297 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:29:48 -0600
Subject: [PATCH 09/18] Delete _toc.yml

---
 _toc.yml | 40 ----------------------------------------
 1 file changed, 40 deletions(-)
 delete mode 100644 _toc.yml

diff --git a/_toc.yml b/_toc.yml
deleted file mode 100644
index 9b277ee2..00000000
--- a/_toc.yml
+++ /dev/null
@@ -1,40 +0,0 @@
-format: jb-book
-root: README
-parts:
-  - caption: Preamble
-    chapters:
-      - file: notebooks/how-to-cite
-
-  - caption: Foundations
-    chapters:
-      - file: notebooks/01-foundations/unstructured-grids
-      - file: notebooks/01-foundations/plotting-libs
-      - file: notebooks/01-foundations/rendering-techniques
-
-  - caption: Introduction to UXarray
-    chapters:
-      - file: notebooks/02-intro-to-uxarray/overview
-      - file: notebooks/02-intro-to-uxarray/grid
-      - file: notebooks/02-intro-to-uxarray/uxds-uxda
-      - file: notebooks/02-intro-to-uxarray/selection
-
-  - caption: Plotting with UXarray
-    chapters:
-      - file: notebooks/03-plotting-with-uxarray/grid-viz
-      - file: notebooks/03-plotting-with-uxarray/data-viz
-      - file: notebooks/03-plotting-with-uxarray/geo
-      - file: notebooks/03-plotting-with-uxarray/customization
-      - file: notebooks/03-plotting-with-uxarray/high-res
-      - file: notebooks/03-plotting-with-uxarray/compare-xarray
-
-  - caption: Visualization Recipes
-    chapters:
-      - file: notebooks/04-recipes/mpas-atmo
-      - file: notebooks/04-recipes/mpas-ocean
-      #      - file: notebooks/04-recipes/mpas-regional
-      - file: notebooks/04-recipes/e3sm
-#  - caption: Compatibility with Visualization Packages
-#    chapters:
-#      - file: notebooks/05-viz-packages/matplotlib
-#      - file: notebooks/05-viz-packages/datashader
-#      - file: notebooks/05-viz-packages/lonboard

From f7315188f9be0ec3981e75d76747ef136cd010ad Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:30:11 -0600
Subject: [PATCH 10/18] Delete _static/custom.css

---
 _static/custom.css | 6 ------
 1 file changed, 6 deletions(-)
 delete mode 100644 _static/custom.css

diff --git a/_static/custom.css b/_static/custom.css
deleted file mode 100644
index 59f43131..00000000
--- a/_static/custom.css
+++ /dev/null
@@ -1,6 +0,0 @@
-.bd-main .bd-content .bd-article-container {
-  max-width: 100%; /* default is 60em */
-}
-.bd-page-width {
-  max-width: 100%; /* default is 88rem */
-}

From dcb9ed947d24680a06459e915fee851877d47c21 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:30:19 -0600
Subject: [PATCH 11/18] Delete _static/footer-logo-nsf.png

---
 _static/footer-logo-nsf.png | Bin 10132 -> 0 bytes
 1 file changed, 0 insertions(+), 0 deletions(-)
 delete mode 100644 _static/footer-logo-nsf.png

diff --git a/_static/footer-logo-nsf.png b/_static/footer-logo-nsf.png
deleted file mode 100644
index 11c788f2a007d0ced73516804cd7c3a257d39476..0000000000000000000000000000000000000000
GIT binary patch
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OoT99nOqG;b(EkDohWdE`


From cb31f6526bda295c7e77cb80545b14ba09d0f9bb Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:30:27 -0600
Subject: [PATCH 12/18] Delete _templates directory

---
 _templates/footer-extra.html | 27 ---------------------------
 1 file changed, 27 deletions(-)
 delete mode 100644 _templates/footer-extra.html

diff --git a/_templates/footer-extra.html b/_templates/footer-extra.html
deleted file mode 100644
index 2b794d89..00000000
--- a/_templates/footer-extra.html
+++ /dev/null
@@ -1,27 +0,0 @@
-<div class="container-fluid footer-extra">
-  <div class="container">
-    <center>
-      Theme by <a href="https://projectpythia.org">Project Pythia</a>. All code
-      in Pythia Cookbooks is licensed under
-      <a href="https://opensource.org/license/apache-2-0">Apache 2.0</a>. All
-      other non-code content is licensed under
-      <a href="https://creativecommons.org/licenses/by/4.0/">
-        Creative Commons BY 4.0 (CC BY 4.0)</a
-      >.
-    </center>
-    <br /><br />
-    <div class="row">
-      <p class="m-0">
-        <img
-          src="{{ pathto('_static/footer-logo-nsf.png', 1) }}"
-          style="float: left; width: 60px; height: 60px; margin-right: 1rem"
-        />
-        This material is based upon work supported by the National Science
-        Foundation under Grant Nos. 2026863 and 2026899. Any opinions, findings,
-        and conclusions or recommendations expressed in this material are those
-        of the author(s) and do not necessarily reflect the views of the
-        National Science Foundation.
-      </p>
-    </div>
-  </div>
-</div>

From 4a5ac639c12d29c5732d4cf2dabcea41fd1b4e22 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:30:47 -0600
Subject: [PATCH 13/18] Update README.md

---
 README.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/README.md b/README.md
index 7ff31e0c..a0bea732 100644
--- a/README.md
+++ b/README.md
@@ -1,10 +1,10 @@
+# Unstructured Grid Visualization Cookbook
+
 <p align="center">
   <img style="float: right;" src="https://raijin.ucar.edu/_static/images/logos/ProjectRaijin_Logo.png" width="225" />
   <img style="float: right;" src="https://raw.githubusercontent.com/ProjectPythia/unstructured-grid-viz-cookbook/main/notebooks/images/logos/SEATSLogoTransparent.png" width="250" />
 </p>
 
-# Unstructured Grid Visualization Cookbook
-
 [![nightly-build](https://github.com/ProjectPythia/unstructured-grid-viz-cookbook/actions/workflows/nightly-build.yaml/badge.svg)](https://github.com/ProjectPythia/unstructured-grid-viz-cookbook/actions/workflows/nightly-build.yaml)
 [![Binder](https://binder.projectpythia.org/badge_logo.svg)](https://binder.projectpythia.org/v2/gh/ProjectPythia/unstructured-grid-viz-cookbook.git/main?labpath=notebooks)
 [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.10403389.svg)](https://doi.org/10.5281/zenodo.10403389)

From ca7c518294e49f96328db109ebdbce9270978a61 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:31:10 -0600
Subject: [PATCH 14/18] Delete _config.yml

---
 _config.yml | 84 -----------------------------------------------------
 1 file changed, 84 deletions(-)
 delete mode 100644 _config.yml

diff --git a/_config.yml b/_config.yml
deleted file mode 100644
index db383ccc..00000000
--- a/_config.yml
+++ /dev/null
@@ -1,84 +0,0 @@
-# Book settings
-# Learn more at https://jupyterbook.org/customize/config.html
-
-title: Unstructured Grids Visualization Cookbook
-description: Comprehensive showcase of workflows and techniques for visualizing Unstructured Grids using UXarray
-author: the <a href="https://projectpythia.org/">Project Pythia</a> Community
-logo: notebooks/images/logos/pythia_logo-white-rtext.svg
-copyright: "2025"
-
-execute:
-  # To execute notebooks via a Binder instead, replace 'cache' with 'binder'
-  execute_notebooks: cache
-  timeout: 600
-  allow_errors: False # cells with expected failures must set the `raises-exception` cell tag
-
-# Add a few extensions to help with parsing content
-parse:
-  myst_enable_extensions: # default extensions to enable in the myst parser. See https://myst-parser.readthedocs.io/en/latest/using/syntax-optional.html
-    - amsmath
-    - colon_fence
-    - deflist
-    - dollarmath
-    - html_admonition
-    - html_image
-    - replacements
-    - smartquotes
-    - substitution
-
-sphinx:
-  config:
-    linkcheck_ignore: ["https://doi.org/*"] # don't run link checker on DOI links since they are immutable
-    nb_execution_raise_on_error: true # raise exception in build if there are notebook errors (this flag is ignored if building on binder)
-    html_favicon: notebooks/images/icons/favicon.ico
-    html_last_updated_fmt: "%-d %B %Y"
-    html_theme: sphinx_pythia_theme
-    html_permalinks_icon: '<i class="fas fa-link"></i>'
-    html_theme_options:
-      home_page_in_toc: true
-      repository_url: https://github.com/ProjectPythia/unstructured-grid-viz-cookbook/ # Online location of your book
-      repository_branch: main # Which branch of the repository should be used when creating links (optional)
-      use_issues_button: true
-      use_repository_button: true
-      use_edit_page_button: true
-      use_fullscreen_button: true
-      analytics:
-        google_analytics_id: G-T52X8HNYE8
-      github_url: https://github.com/ProjectPythia/unstructured-grid-viz-cookbook
-      twitter_url: https://twitter.com/project_pythia
-      icon_links:
-        - name: YouTube
-          url: https://www.youtube.com/channel/UCoZPBqJal5uKpO8ZiwzavCw
-          icon: fab fa-youtube-square
-          type: fontawesome
-      launch_buttons:
-        binderhub_url: https://binder.projectpythia.org
-        notebook_interface: jupyterlab
-      extra_navbar: |
-        Theme by <a href="https://projectpythia.org">Project Pythia</a>.<br><br>
-        All code in Pythia Cookbooks is licensed under Apache 2.0. All other non-code content is licensed under <a href="https://creativecommons.org/licenses/by/4.0/">Creative Commons BY 4.0 (CC BY 4.0)</a>.<br><br>
-      logo:
-        link: https://projectpythia.org
-      navbar_start:
-        - navbar-logo
-      navbar_end:
-        - navbar-icon-links
-      navbar_links:
-        - name: Home
-          url: https://projectpythia.org
-        - name: Foundations
-          url: https://foundations.projectpythia.org
-        - name: Cookbooks
-          url: https://cookbooks.projectpythia.org
-        - name: Resources
-          url: https://projectpythia.org/resource-gallery.html
-        - name: Community
-          url: https://projectpythia.org/index.html#join-us
-      footer_logos:
-        NCAR: notebooks/images/logos/NSF-NCAR_Lockup-UCAR-Dark_102523.svg
-        Unidata: notebooks/images/logos/Unidata_logo_horizontal_1200x300.svg
-        UAlbany: notebooks/images/logos/UAlbany-A2-logo-purple-gold.svg
-      footer_start:
-        - footer-logos
-        - footer-info
-        - footer-extra

From 88bcb28f7284657cac8b98d1ce07ef3156bb0f13 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:31:22 -0600
Subject: [PATCH 15/18] Delete .pre-commit-config.yaml

---
 .pre-commit-config.yaml | 51 -----------------------------------------
 1 file changed, 51 deletions(-)
 delete mode 100644 .pre-commit-config.yaml

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
deleted file mode 100644
index 4fa4c46d..00000000
--- a/.pre-commit-config.yaml
+++ /dev/null
@@ -1,51 +0,0 @@
-repos:
-  - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.4.0
-    hooks:
-      - id: trailing-whitespace
-      - id: end-of-file-fixer
-      - id: check-docstring-first
-      - id: check-json
-      - id: check-yaml
-      - id: double-quote-string-fixer
-
-  - repo: https://github.com/psf/black
-    rev: 23.7.0
-    hooks:
-      - id: black
-
-  - repo: https://github.com/keewis/blackdoc
-    rev: v0.3.8
-    hooks:
-      - id: blackdoc
-
-  - repo: https://github.com/PyCQA/flake8
-    rev: 6.0.0
-    hooks:
-      - id: flake8
-
-  - repo: https://github.com/asottile/seed-isort-config
-    rev: v2.2.0
-    hooks:
-      - id: seed-isort-config
-
-  - repo: https://github.com/PyCQA/isort
-    rev: 5.12.0
-    hooks:
-      - id: isort
-
-  - repo: https://github.com/pre-commit/mirrors-prettier
-    rev: v3.0.0
-    hooks:
-      - id: prettier
-        additional_dependencies: [prettier@v2.7.1]
-
-  - repo: https://github.com/nbQA-dev/nbQA
-    rev: 1.7.0
-    hooks:
-      - id: nbqa-black
-        additional_dependencies: [black]
-      - id: nbqa-pyupgrade
-        additional_dependencies: [pyupgrade]
-      - id: nbqa-isort
-        additional_dependencies: [isort]

From 59c41d3948c2b388d5a37c00a542b7fa911eb0e2 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:33:31 -0600
Subject: [PATCH 16/18] Add files via upload

---
 .github/nightly-build.yaml | 19 +++++++++++++++++++
 1 file changed, 19 insertions(+)
 create mode 100644 .github/nightly-build.yaml

diff --git a/.github/nightly-build.yaml b/.github/nightly-build.yaml
new file mode 100644
index 00000000..990e7eba
--- /dev/null
+++ b/.github/nightly-build.yaml
@@ -0,0 +1,19 @@
+name: nightly-build
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: "0 0 * * *" # Daily “At 00:00”
+
+jobs:
+  build:
+    if: ${{ github.repository_owner == 'ProjectPythia' }}
+    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
+
+  deploy:
+    needs: build
+    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
+
+  link-check:
+    if: ${{ github.repository_owner == 'ProjectPythia' }}
+    uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main

From 6a92685906e3e500e2f12bd081a5e56b41caed62 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:33:47 -0600
Subject: [PATCH 17/18] Rename .github/nightly-build.yaml to
 .github/workflows/nightly-build.yaml

---
 .github/{ => workflows}/nightly-build.yaml | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
 rename .github/{ => workflows}/nightly-build.yaml (100%)

diff --git a/.github/nightly-build.yaml b/.github/workflows/nightly-build.yaml
similarity index 100%
rename from .github/nightly-build.yaml
rename to .github/workflows/nightly-build.yaml

From 75b70783213236463d8ffe66b2ddf0c1fb3979c3 Mon Sep 17 00:00:00 2001
From: Julia Kent <46687291+jukent@users.noreply.github.com>
Date: Tue, 17 Jun 2025 21:34:07 -0600
Subject: [PATCH 18/18] Add files via upload

---
 .github/workflows/publish-book.yaml           | 16 ++++++++++
 .github/workflows/trigger-book-build.yaml     | 11 +++++++
 .github/workflows/trigger-delete-preview.yaml |  9 ++++++
 .github/workflows/trigger-link-check.yaml     |  7 +++++
 .github/workflows/trigger-preview.yaml        | 27 ++++++++++++++++
 .github/workflows/trigger-replace-links.yaml  | 31 +++++++++++++++++++
 6 files changed, 101 insertions(+)
 create mode 100644 .github/workflows/publish-book.yaml
 create mode 100644 .github/workflows/trigger-book-build.yaml
 create mode 100644 .github/workflows/trigger-delete-preview.yaml
 create mode 100644 .github/workflows/trigger-link-check.yaml
 create mode 100644 .github/workflows/trigger-preview.yaml
 create mode 100644 .github/workflows/trigger-replace-links.yaml

diff --git a/.github/workflows/publish-book.yaml b/.github/workflows/publish-book.yaml
new file mode 100644
index 00000000..4e7fd1ee
--- /dev/null
+++ b/.github/workflows/publish-book.yaml
@@ -0,0 +1,16 @@
+name: publish-book
+
+on:
+  # Trigger the workflow on push to main branch
+  push:
+    branches:
+      - main
+  workflow_dispatch:
+
+jobs:
+  build:
+    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
+
+  deploy:
+    needs: build
+    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
diff --git a/.github/workflows/trigger-book-build.yaml b/.github/workflows/trigger-book-build.yaml
new file mode 100644
index 00000000..c2b08f34
--- /dev/null
+++ b/.github/workflows/trigger-book-build.yaml
@@ -0,0 +1,11 @@
+name: trigger-book-build
+on:
+  pull_request:
+
+jobs:
+  build:
+    uses: ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml@main
+    with:
+      artifact_name: book-zip-${{ github.event.number }}
+      base_url: '/${{ github.event.repository.name }}/_preview/${{ github.event.number }}'
+      # Other input options are possible, see ProjectPythia/cookbook-actions/.github/workflows/build-book.yaml
diff --git a/.github/workflows/trigger-delete-preview.yaml b/.github/workflows/trigger-delete-preview.yaml
new file mode 100644
index 00000000..06e13e5c
--- /dev/null
+++ b/.github/workflows/trigger-delete-preview.yaml
@@ -0,0 +1,9 @@
+name: trigger-delete-preview
+
+on:
+  pull_request_target:
+    types: closed
+
+jobs:
+  delete:
+    uses: ProjectPythia/cookbook-actions/.github/workflows/delete-preview.yaml@main
diff --git a/.github/workflows/trigger-link-check.yaml b/.github/workflows/trigger-link-check.yaml
new file mode 100644
index 00000000..e2402ddc
--- /dev/null
+++ b/.github/workflows/trigger-link-check.yaml
@@ -0,0 +1,7 @@
+name: trigger-link-check
+on:
+  pull_request:
+
+jobs:
+  link-check:
+    uses: ProjectPythia/cookbook-actions/.github/workflows/link-checker.yaml@main
diff --git a/.github/workflows/trigger-preview.yaml b/.github/workflows/trigger-preview.yaml
new file mode 100644
index 00000000..049b5d0b
--- /dev/null
+++ b/.github/workflows/trigger-preview.yaml
@@ -0,0 +1,27 @@
+name: trigger-preview
+on:
+  workflow_run:
+    workflows:
+      - trigger-book-build
+    types:
+      - requested
+      - completed
+
+jobs:
+  find-pull-request:
+    uses: ProjectPythia/cookbook-actions/.github/workflows/find-pull-request.yaml@main
+  deploy-preview:
+    needs: find-pull-request
+    if: github.event.workflow_run.conclusion == 'success'
+    uses: ProjectPythia/cookbook-actions/.github/workflows/deploy-book.yaml@main
+    with:
+      artifact_name: book-zip-${{ needs.find-pull-request.outputs.number }}
+      destination_dir: _preview/${{ needs.find-pull-request.outputs.number }} # deploy to subdirectory labeled with PR number
+      is_preview: "true"
+
+  preview-comment:
+    needs: find-pull-request
+    uses: ProjectPythia/cookbook-actions/.github/workflows/preview-comment.yaml@main
+    with:
+      pull_request_number: ${{ needs.find-pull-request.outputs.number }}
+      sha: ${{ needs.find-pull-request.outputs.sha }}
diff --git a/.github/workflows/trigger-replace-links.yaml b/.github/workflows/trigger-replace-links.yaml
new file mode 100644
index 00000000..1d1e8547
--- /dev/null
+++ b/.github/workflows/trigger-replace-links.yaml
@@ -0,0 +1,31 @@
+name: trigger-replace-links
+
+on:
+  workflow_dispatch:
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+
+    steps:
+      - uses: actions/checkout@v3
+      - name: Find and Replace Repository Name
+        uses: jacobtomlinson/gha-find-replace@v3
+        with:
+          find: "ProjectPythia/cookbook-template"
+          replace: "${{ github.repository_owner }}/${{ github.event.repository.name }}"
+          regex: false
+          exclude: ".github/workflows/trigger-replace-links.yaml"
+
+      - name: Find and Replace Repository ID
+        uses: jacobtomlinson/gha-find-replace@v3
+        with:
+          find: "475509405"
+          replace: "${{ github.repository_id}}"
+          regex: false
+          exclude: ".github/workflows/trigger-replace-links.yml"
+
+      - name: Push changes
+        uses: stefanzweifel/git-auto-commit-action@v4