From cc7861c767fd999c2d4236502f47ffce7e9b76c0 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 7 Oct 2024 08:48:36 +0000
Subject: [PATCH 1/5] Update sphinx-rtd-theme requirement from <3.0,>=1.0 to
 >=1.0,<4.0

Updates the requirements on [sphinx-rtd-theme](https://github.com/readthedocs/sphinx_rtd_theme) to permit the latest version.
- [Changelog](https://github.com/readthedocs/sphinx_rtd_theme/blob/master/docs/changelog.rst)
- [Commits](https://github.com/readthedocs/sphinx_rtd_theme/compare/1.0.0...3.0.0)

---
updated-dependencies:
- dependency-name: sphinx-rtd-theme
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 docs/requirements-docs.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/requirements-docs.txt b/docs/requirements-docs.txt
index a54dbf10..08f167e8 100644
--- a/docs/requirements-docs.txt
+++ b/docs/requirements-docs.txt
@@ -7,4 +7,4 @@
 # => The sphix requirement must not be >=6.0
 
 sphinx >=5.0, <9.0
-sphinx-rtd-theme >=1.0, <3.0
+sphinx-rtd-theme >=1.0, <4.0

From 27c4b316fa2a3b9423c816836da818deea5f4583 Mon Sep 17 00:00:00 2001
From: andthum <56444687+andthum@users.noreply.github.com>
Date: Thu, 31 Oct 2024 15:30:47 +0100
Subject: [PATCH 2/5] [requirements-docs.txt]: Reverse sphinx-rtd-theme Update

sphinx-rtd-theme version 3.0 drops support for Python `<3.8`
(https://sphinx-rtd-theme.readthedocs.io/en/latest/changelog.html#rc1).
Because MDTools supports Python `>=3.6, <3.10`, sphinx-rtd-theme should
not be updated.
---
 docs/requirements-docs.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/docs/requirements-docs.txt b/docs/requirements-docs.txt
index 08f167e8..a54dbf10 100644
--- a/docs/requirements-docs.txt
+++ b/docs/requirements-docs.txt
@@ -7,4 +7,4 @@
 # => The sphix requirement must not be >=6.0
 
 sphinx >=5.0, <9.0
-sphinx-rtd-theme >=1.0, <4.0
+sphinx-rtd-theme >=1.0, <3.0

From b663324b9c99dc4a12272ad461558b985beb3c6c Mon Sep 17 00:00:00 2001
From: andthum <56444687+andthum@users.noreply.github.com>
Date: Thu, 31 Oct 2024 15:05:09 +0100
Subject: [PATCH 3/5] [statistics.py]: Fix Broken Link

---
 src/mdtools/statistics.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/mdtools/statistics.py b/src/mdtools/statistics.py
index 875a80e5..a9a4358e 100644
--- a/src/mdtools/statistics.py
+++ b/src/mdtools/statistics.py
@@ -516,7 +516,7 @@ def acf_se(x, axis=None, n=None):
         <https://en.wikipedia.org/wiki/Correlogram#Statistical_inference_with_correlograms>`_
 
     .. [#] Wikipedia `Autoregressive-moving-average model
-        <https://en.wikipedia.org/wiki/Autoregressive%E2%80%93moving-average_model#Moving-average_model>`_
+        <https://en.wikipedia.org/wiki/Autoregressive%E2%80%93moving-average_model#Moving_average_model>`_
 
     Examples
     --------
@@ -710,7 +710,7 @@ def acf_confint(x, axis=None, alpha=0.05, n=None):
         <https://en.wikipedia.org/wiki/Normal_distribution#Quantile_function>`_
 
     .. [3] Wikipedia `Autoregressive-moving-average model
-        <https://en.wikipedia.org/wiki/Autoregressive%E2%80%93moving-average_model#Moving-average_model>`_
+        <https://en.wikipedia.org/wiki/Autoregressive%E2%80%93moving-average_model#Moving_average_model>`_
 
     Examples
     --------

From 421081511dc54c61ab3eea237a5bfad04840ee4a Mon Sep 17 00:00:00 2001
From: andthum <56444687+andthum@users.noreply.github.com>
Date: Thu, 31 Oct 2024 15:19:27 +0100
Subject: [PATCH 4/5] [conf.py]: Linkcheck: Extend List of Ignored URLs

---
 docs/source/conf.py | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/docs/source/conf.py b/docs/source/conf.py
index 84838b7b..bc302a19 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -485,6 +485,10 @@
     r"https://doi\.org/10\.1073/pnas\.1900239116",
     r"https://doi\.org/10\.1080/00031305\.2017\.1356374",
     r"https://doi\.org/10\.1080/01621459\.1958\.10501452",
+    r"https://doi\.org/10\.1103/PhysRev\.126\.986",
+    r"https://doi\.org/10\.1103/PhysRev\.136\.A405",
+    r"https://doi\.org/10\.1103/PhysRevB\.74\.184430",
+    r"https://doi\.org/10\.1103/PhysRevLett\.98\.227802",
     # 418 Client Error: Unknown for url.
     r"https://doi\.org/10\.1109/TSMC\.1979\.4310076",
 ]

From 4a502479d6e0ada882b99b80486bc055524d6b5d Mon Sep 17 00:00:00 2001
From: andthum <56444687+andthum@users.noreply.github.com>
Date: Thu, 31 Oct 2024 14:54:26 +0100
Subject: [PATCH 5/5] [tests-skip.yml]: Harmonize with tests.yml

Use `macos-13` instead of `macos-latest` like in `tests.yml`.
---
 .github/workflows/tests-skip.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/tests-skip.yml b/.github/workflows/tests-skip.yml
index a99236f3..3dd48731 100644
--- a/.github/workflows/tests-skip.yml
+++ b/.github/workflows/tests-skip.yml
@@ -55,7 +55,7 @@ jobs:
         # Tests must be run on all target platforms and Python versions.
         os:
           - "ubuntu-latest"
-          - "macos-latest"
+          - "macos-13"
           - "windows-latest"
         python-version:
           - "3.6"