Closed
Description
Bug report
#5661 doesn't fix kebab-case parameters specified in -params-file.
Expected behavior and actual behavior
regression described in #5655 applies to declarations in params-file, which, per documentation, should be equivalent to parameters passed in cli.
Parameters defined in the file are equivalent to specifying them directly on the command line
Steps to reproduce the problem
test.nf:
params.longParam = "unchanged"
workflow {
log.info "${params}"
log.info "${params.longParam}"
}
test.yaml:
long-param: kebab
test2.yaml:
longParam: camel
Program output
23.10.1
# nextflow run test.nf --long-param kebab
[long-param:kebab, longParam:kebab]
kebab
# nextflow run test.nf --longParam camel
[longParam:camel, long-param:camel]
camel
# nextflow run test.nf -params-file test.yaml
[long-param:kebab, longParam:kebab]
kebab
# nextflow run test.nf -params-file test2.yaml
[longParam:camel, long-param:camel]
camel
24.10.5
# nextflow run test.nf --long-param kebab
[longParam:kebab]
kebab
# nextflow run test.nf --longParam camel
[longParam:camel]
camel
# nextflow run test.nf -params-file test.yaml
[long-param:kebab, longParam:unchanged]
unchanged
# nextflow run test.nf -params-file test2.yaml
[longParam:camel]
camel
Environment
- Nextflow version: 24.10.5