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@HighlanderLab

HighlanderLab

Software for the management and improvement of populations using data science, genetics, and breeding

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  1. jbancic_alphasimr_plants jbancic_alphasimr_plants Public

    Plant breeding simulations with AlphaSimR

    HTML 19 15

  2. EUCARPIA2025BiometricsPlantBreeding EUCARPIA2025BiometricsPlantBreeding Public

    This is a repository hosting public information about the EUCARPIA 2025 Biometrics in Plant Breeding in Edinburgh 17-19th September 2025 + Satellite workshop 15-16th September

    Ruby 5 2

  3. RandPedPCA RandPedPCA Public

    Principal Component Analysis of Pedigree Relationship Matrix via Randomized SVD

    Jupyter Notebook 5 4

  4. jbancic_GEIsim jbancic_GEIsim Public

    This repository contains examples of code for simulating genotype by environment interaction

    R 4 1

  5. tree_seq_pipeline tree_seq_pipeline Public

    Pipeline to infer tree sequences with different datasets

    Python 3 7

  6. gmafrafortuna_mtdna_breed gmafrafortuna_mtdna_breed Public

    Accounting for nuclear - and mito-genome in dairy cattle breeding: a simulation study

    R 2

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