Search results

Score factory

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

Status: Open.

#424 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Apr 29, 2025

doi.org/10.1101/2025.03.10.25323586

vdjdb-records-preprintA study listing TCRs and cognate antigens available on arxiv/biorxivA study listing TCRs and cognate antigens available on arxiv/biorxiv

Status: Open.

#423 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Apr 28, 2025

10.1016/j.ebiom.2025.105697

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#422 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Apr 28, 2025

10.1126/sciimmunol.adp5016

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#416 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Mar 19, 2025

PMID:39211225

vdjdb-records-preprintA study listing TCRs and cognate antigens available on arxiv/biorxivA study listing TCRs and cognate antigens available on arxiv/biorxiv

Status: Open.

#413 In antigenomics/vdjdb-db;

· Ajaingithub opened on Mar 12, 2025

PMID:39951541

vdjdb-records-associationsInferred (directly or indirectly) antigen receptor:condition associations.Inferred (directly or indirectly) antigen receptor:condition associations.

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#408 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Feb 19, 2025

Update records with available TCR:pMHC structures

vdjdb-records-other-dbAntigen specificity information present in public databases, e.g. genbank or PDBAntigen specificity information present in public databases, e.g. genbank or PDB

vdjdb-structuralInterop with structural dataInterop with structural data

vdjdb-typosMinor typos to fixMinor typos to fix

Status: Open.

#402 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Jan 24, 2025

Missing vdjdb.score Column in vdjdb_full.txt of Latest Database Release

vdjdb-records-formatting&proofreadingTypos and errors that need to be fixed in one or multiple VDJdb recordsTypos and errors that need to be fixed in one or multiple VDJdb records

Status: Open.

#399 In antigenomics/vdjdb-db;

· yoshiF7d opened on Jan 8, 2025

duplicated dataset

duplicateA duplicate issueA duplicate issue

Status: Open.

#390 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Sep 16, 2024

VDJ genes nomenclature

vdjdb-build-infrastructureVDJdb aggregation, compilation and proofreading infrastructure developmentVDJdb aggregation, compilation and proofreading infrastructure development

Status: Open.

#389 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Sep 10, 2024

PMID:36778273

vdjdb-records-paperA published study listing TCRs and cognate antigens with PubMed IDA published study listing TCRs and cognate antigens with PubMed ID

Status: Open.

#388 In antigenomics/vdjdb-db;

· LuppovDaniil opened on Aug 29, 2024

PMID:38744246

vdj-10x-immudexscRNA-seq dataset prepared using 10X Genomics kit (or similar) + UMI-tagged MHC-multimersscRNA-seq dataset prepared using 10X Genomics kit (or similar) + UMI-tagged MHC-multimers

vdjdb-records-associationsInferred (directly or indirectly) antigen receptor:condition associations.Inferred (directly or indirectly) antigen receptor:condition associations.

Status: Open.

#376 In antigenomics/vdjdb-db;

· mikessh opened on Jun 9, 2024