Update core.py for numpy > 1.20.0 #25
Open
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
I did a simple find and replace of np.int with built-in python int
This is described at https://numpy.org/devdocs/release/1.20.0-notes.html
Note this: When replacing
np.int
, you may wish to use e.g.np.int64
ornp.int32
to specify the precision. I did not do this.With this, harmonyTS runs on my recent python 3.11 with latest scanpy and numpy==2.1.3