@@ -186,13 +186,13 @@ <h2 title="Contents">Contents</h2>
186
186
</ td >
187
187
</ tr >
188
188
< tr class ="altColor ">
189
- < td class ="colOne "> < a href ="org/micromanager/acquisition/ChannelSpec .html#channelGroup "> org.micromanager.acquisition.ChannelSpec .channelGroup</ a >
190
- < div class ="block "> < span class ="deprecationComment "> Use Builder and getters instead</ span > </ div >
189
+ < td class ="colOne "> < a href ="org/micromanager/acquisition/SequenceSettings .html#channelGroup "> org.micromanager.acquisition.SequenceSettings .channelGroup</ a >
190
+ < div class ="block "> < span class ="deprecationComment "> use Builder and channelGroup() instead</ span > </ div >
191
191
</ td >
192
192
</ tr >
193
193
< tr class ="rowColor ">
194
- < td class ="colOne "> < a href ="org/micromanager/acquisition/SequenceSettings .html#channelGroup "> org.micromanager.acquisition.SequenceSettings .channelGroup</ a >
195
- < div class ="block "> < span class ="deprecationComment "> use Builder and channelGroup() instead</ span > </ div >
194
+ < td class ="colOne "> < a href ="org/micromanager/acquisition/ChannelSpec .html#channelGroup "> org.micromanager.acquisition.ChannelSpec .channelGroup</ a >
195
+ < div class ="block "> < span class ="deprecationComment "> Use Builder and getters instead</ span > </ div >
196
196
</ td >
197
197
</ tr >
198
198
< tr class ="altColor ">
@@ -404,35 +404,35 @@ <h2 title="Contents">Contents</h2>
404
404
</ td >
405
405
</ tr >
406
406
< tr class ="rowColor ">
407
+ < td class ="colOne "> < a href ="org/micromanager/PropertyMap.html#copy-- "> org.micromanager.PropertyMap.copy()</ a > </ td >
408
+ </ tr >
409
+ < tr class ="altColor ">
410
+ < td class ="colOne "> < a href ="org/micromanager/acquisition/SequenceSettings.html#copy-- "> org.micromanager.acquisition.SequenceSettings.copy()</ a >
411
+ < div class ="block "> < span class ="deprecationComment "> When used correctly, SequenceSettings are immutable.
412
+ If you really need a copy, use copyBuilder().build();</ span > </ div >
413
+ </ td >
414
+ </ tr >
415
+ < tr class ="rowColor ">
416
+ < td class ="colOne "> < a href ="org/micromanager/display/DisplaySettings.html#copy-- "> org.micromanager.display.DisplaySettings.copy()</ a > </ td >
417
+ </ tr >
418
+ < tr class ="altColor ">
407
419
< td class ="colOne "> < a href ="org/micromanager/data/Metadata.html#copy-- "> org.micromanager.data.Metadata.copy()</ a >
408
420
< div class ="block "> < span class ="deprecationComment "> Use the appropriate of the following:
409
421
< a href ="org/micromanager/data/Metadata.html#copyBuilderPreservingUUID-- "> < code > Metadata.copyBuilderPreservingUUID()</ code > </ a > , < a href ="org/micromanager/data/Metadata.html#copyBuilderWithNewUUID-- "> < code > Metadata.copyBuilderWithNewUUID()</ code > </ a > ,
410
422
< a href ="org/micromanager/data/Metadata.html#copyBuilderRemovingUUID-- "> < code > Metadata.copyBuilderRemovingUUID()</ code > </ a > . This method is equivalent to
411
423
< code > copyBuilderPreservingUUID</ code > .</ span > </ div >
412
424
</ td >
413
425
</ tr >
414
- < tr class ="altColor ">
426
+ < tr class ="rowColor ">
415
427
< td class ="colOne "> < a href ="org/micromanager/data/SummaryMetadata.html#copy-- "> org.micromanager.data.SummaryMetadata.copy()</ a >
416
428
< div class ="block "> < span class ="deprecationComment "> - Use SummaryMetadata.Builder.copyBuilder instead</ span > </ div >
417
429
</ td >
418
430
</ tr >
419
- < tr class ="rowColor ">
431
+ < tr class ="altColor ">
420
432
< td class ="colOne "> < a href ="org/micromanager/data/Coords.html#copy-- "> org.micromanager.data.Coords.copy()</ a >
421
433
< div class ="block "> < span class ="deprecationComment "> Use < a href ="org/micromanager/data/Coords.html#copyBuilder-- "> < code > copyBuilder</ code > </ a > instead</ span > </ div >
422
434
</ td >
423
435
</ tr >
424
- < tr class ="altColor ">
425
- < td class ="colOne "> < a href ="org/micromanager/PropertyMap.html#copy-- "> org.micromanager.PropertyMap.copy()</ a > </ td >
426
- </ tr >
427
- < tr class ="rowColor ">
428
- < td class ="colOne "> < a href ="org/micromanager/display/DisplaySettings.html#copy-- "> org.micromanager.display.DisplaySettings.copy()</ a > </ td >
429
- </ tr >
430
- < tr class ="altColor ">
431
- < td class ="colOne "> < a href ="org/micromanager/acquisition/SequenceSettings.html#copy-- "> org.micromanager.acquisition.SequenceSettings.copy()</ a >
432
- < div class ="block "> < span class ="deprecationComment "> When used correctly, SequenceSettings are immutable.
433
- If you really need a copy, use copyBuilder().build();</ span > </ div >
434
- </ td >
435
- </ tr >
436
436
< tr class ="rowColor ">
437
437
< td class ="colOne "> < a href ="org/micromanager/data/DataManager.html#createCoords-java.lang.String- "> org.micromanager.data.DataManager.createCoords(String)</ a >
438
438
< div class ="block "> < span class ="deprecationComment "> use of Strings for Coords is discouraged</ span > </ div >
@@ -538,13 +538,13 @@ <h2 title="Contents">Contents</h2>
538
538
</ td >
539
539
</ tr >
540
540
< tr class ="rowColor ">
541
- < td class ="colOne "> < a href ="org/micromanager/display/AbstractDataViewer .html#getDatastore-- "> org.micromanager.display.AbstractDataViewer .getDatastore()</ a >
542
- < div class ="block "> < span class ="deprecationComment "> user code should call < code > getDataProvider</ code > </ span > </ div >
541
+ < td class ="colOne "> < a href ="org/micromanager/display/DataViewer .html#getDatastore-- "> org.micromanager.display.DataViewer .getDatastore()</ a >
542
+ < div class ="block "> < span class ="deprecationComment "> use < a href =" org/micromanager/display/DataViewer.html#getDataProvider-- " > < code > DataViewer. getDataProvider() </ code > </ a > instead </ span > </ div >
543
543
</ td >
544
544
</ tr >
545
545
< tr class ="altColor ">
546
- < td class ="colOne "> < a href ="org/micromanager/display/DataViewer .html#getDatastore-- "> org.micromanager.display.DataViewer .getDatastore()</ a >
547
- < div class ="block "> < span class ="deprecationComment "> use < a href =" org/micromanager/display/DataViewer.html#getDataProvider-- " > < code > DataViewer. getDataProvider() </ code > </ a > instead </ span > </ div >
546
+ < td class ="colOne "> < a href ="org/micromanager/display/AbstractDataViewer .html#getDatastore-- "> org.micromanager.display.AbstractDataViewer .getDatastore()</ a >
547
+ < div class ="block "> < span class ="deprecationComment "> user code should call < code > getDataProvider</ code > </ span > </ div >
548
548
</ td >
549
549
</ tr >
550
550
< tr class ="rowColor ">
@@ -722,13 +722,13 @@ <h2 title="Contents">Contents</h2>
722
722
< td class ="colOne "> < a href ="org/micromanager/PropertyMap.html#getPropertyMap-java.lang.String- "> org.micromanager.PropertyMap.getPropertyMap(String)</ a > </ td >
723
723
</ tr >
724
724
< tr class ="altColor ">
725
- < td class ="colOne "> < a href ="org/micromanager/data/DataManager .html#getPropertyMapBuilder-- "> org.micromanager.data.DataManager .getPropertyMapBuilder()</ a >
726
- < div class ="block "> < span class ="deprecationComment "> Use PropertyMaps.builder() instead</ span > </ div >
725
+ < td class ="colOne "> < a href ="org/micromanager/display/DisplayManager .html#getPropertyMapBuilder-- "> org.micromanager.display.DisplayManager .getPropertyMapBuilder()</ a >
726
+ < div class ="block "> < span class ="deprecationComment "> Use < a href =" org/micromanager/ PropertyMaps.html# builder-- " > < code > PropertyMaps.builder() </ code > </ a > instead</ span > </ div >
727
727
</ td >
728
728
</ tr >
729
729
< tr class ="rowColor ">
730
- < td class ="colOne "> < a href ="org/micromanager/display/DisplayManager .html#getPropertyMapBuilder-- "> org.micromanager.display.DisplayManager .getPropertyMapBuilder()</ a >
731
- < div class ="block "> < span class ="deprecationComment "> Use < a href =" org/micromanager/ PropertyMaps.html# builder-- " > < code > PropertyMaps.builder() </ code > </ a > instead</ span > </ div >
730
+ < td class ="colOne "> < a href ="org/micromanager/data/DataManager .html#getPropertyMapBuilder-- "> org.micromanager.data.DataManager .getPropertyMapBuilder()</ a >
731
+ < div class ="block "> < span class ="deprecationComment "> Use PropertyMaps.builder() instead</ span > </ div >
732
732
</ td >
733
733
</ tr >
734
734
< tr class ="altColor ">
@@ -916,13 +916,13 @@ <h2 title="Contents">Contents</h2>
916
916
</ td >
917
917
</ tr >
918
918
< tr class ="altColor ">
919
- < td class ="colOne "> < a href ="org/micromanager/display/AbstractDataViewer .html#setDisplayedImageTo-org.micromanager.data.Coords- "> org.micromanager.display.AbstractDataViewer .setDisplayedImageTo(Coords)</ a >
920
- < div class ="block "> < span class ="deprecationComment "> user code should call < code > setDisplayPosition</ code > </ span > </ div >
919
+ < td class ="colOne "> < a href ="org/micromanager/display/DataViewer .html#setDisplayedImageTo-org.micromanager.data.Coords- "> org.micromanager.display.DataViewer .setDisplayedImageTo(Coords)</ a >
920
+ < div class ="block "> < span class ="deprecationComment "> use < a href =" org/micromanager/display/DataViewer.html#setDisplayPosition-org.micromanager.data.Coords- " > < code > DataViewer. setDisplayPosition(Coords) </ code > </ a > instead </ span > </ div >
921
921
</ td >
922
922
</ tr >
923
923
< tr class ="rowColor ">
924
- < td class ="colOne "> < a href ="org/micromanager/display/DataViewer .html#setDisplayedImageTo-org.micromanager.data.Coords- "> org.micromanager.display.DataViewer .setDisplayedImageTo(Coords)</ a >
925
- < div class ="block "> < span class ="deprecationComment "> use < a href =" org/micromanager/display/DataViewer.html#setDisplayPosition-org.micromanager.data.Coords- " > < code > DataViewer. setDisplayPosition(Coords) </ code > </ a > instead </ span > </ div >
924
+ < td class ="colOne "> < a href ="org/micromanager/display/AbstractDataViewer .html#setDisplayedImageTo-org.micromanager.data.Coords- "> org.micromanager.display.AbstractDataViewer .setDisplayedImageTo(Coords)</ a >
925
+ < div class ="block "> < span class ="deprecationComment "> user code should call < code > setDisplayPosition</ code > </ span > </ div >
926
926
</ td >
927
927
</ tr >
928
928
< tr class ="altColor ">
0 commit comments