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Allow variant_id to be 'O' dtype to support variable length strings #116

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merged 2 commits into from
Aug 17, 2020

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tomwhite
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This fixes #98 for variant_id, which I need for #104.

Should we change sample_id too, or do we always have the list of sample IDs up front?

@tomwhite tomwhite requested a review from eric-czech August 17, 2020 09:12
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Should we change sample_id too, or do we always have the list of sample IDs up front?

I don't see why we wouldn't want to support both for IO functions (+1 to changing for sample_id too).

@tomwhite tomwhite force-pushed the variable-length-strings branch from 5ccecb0 to 9243478 Compare August 17, 2020 09:46
@tomwhite tomwhite merged commit da4df51 into sgkit-dev:master Aug 17, 2020
@tomwhite tomwhite deleted the variable-length-strings branch August 17, 2020 10:33
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Support fixed and dynamic length allele strings in IO readers
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