Machine Learning models for in vitro enzyme kinetic parameter prediction

A Python parser for the BRENDA database

Python toolkit and package for analyzing enzyme activity data

LBplot is a python program to plot Lineweaver-Burk double reciprocal plots and calculate basic statistics from V0 and [S] data.

🔬 mtphandler is Python package for processing, enriching, and converting microtiter plate data into standardized EnzymeML time-course data, ready for data science

A Python module for analysis and visualization of dose-response data

Organize and analyze plate-reader data from 96-well plate kinetics experiments. Specifically tailored for PGO assays but can be modified to fit many more.

A QM-MM Tutorial of Enzyme Reaction Dynamics

This repository contains the code, data, and analysis scripts for our RNA-Seq gene expression study of adult ruff sandpipers (Calidris pugnax). This study explores morph-specific differences in gene expression and steroid hormone metabolism, focusing on the key enzyme HSD17B2.

Stochastic chemical kinetics using Gillespie algorithm and chemical master equation, application to enzyme kinetics

A library for parsing out data from the BRENDA database html files

Thermodynamics can present itself as kinetic inhibition

Enzyme kinetic assays in the Fluidigm Biomark HD instrument

steady-state rate equations for enzyme-catalyzed reactions

Michaelis-Menten equations in Matlab

A library for generalized kinetics format

Enzyme Kinetics in R

MSc thesis submitted to University of Hertfordshire

Analysis of Michaelis–Menten enzyme kinetics using the Lineweaver–Burk plot

BioOpti is a toolkit for optimizing biochemical processes, including culture media and enzyme reaction rates. It helps tailor nutrient ratios for optimal growth and simulate enzyme activity under varying conditions, supporting efficient bioprocess optimization in research and industry.