SPAdes Genome Assembler
Software for prediction of plasmid sequences in metagenomic assemblies
Deep learning for Metagenome Assembly Error Detection
Metagenomic binning based on Hi-C data
Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins
Identifying misassemblies via deep learning
Environmental metagenomics, Spring 2021, Physalia Courses
Workflow for metagenome assembly
Create a blobplot of a holobiont assembly without a reference genome. Example code and data are provided.
MetaBolt: Lightning fast & automated metagenomic pipeline powered by Nextflow
Statistical package for metaome denovo assembly results.
Code associated with the Ley Lab animal gut metagenome assembly project
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
Run multiple metagenome filtering programs using Docker containers
Description of the bioinformatic workflow applied in Passaro et al 2019
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