Registry of containerized biosimulation tools that support a standard command-line interface
-
Updated
Aug 13, 2025 - Python
Registry of containerized biosimulation tools that support a standard command-line interface
Basic Mathematic Model | Study Notes & Demos
A P2P contribution protocol with token issuance, prestige evaluation, and decentralized governance.
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Code associated with the Karr Lab's 2018 whole-cell modeling review in Current Opinion in Biotechnology
Data, code and interactive figures for the preprint "Quantitative analysis of tumour spheroid structure”.
A Mathematical Model for Orbit Debris Proliferation. This project also includes Jacobian analysis for finding equilibrium solutions and stability point.
"Cluster Assembly Dynamics Drive Fidelity of Planar Cell Polarity Polarization" published in bioRxiv (2025)
"Circling in on Convective Self-Aggregation" published in Journal of Geophysical Research: Atmospheres (2021)
MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
XPP mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
BoolNet biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
This portfolio brings together all the major projects I carried out during my training at the National Advanced School Of Engineering of Yaoundé.
Simulation of a Mathematical Model of Homeostatic Regulation of Sleep-Wake Cycles by Hypocretin/Orexin (Postnova et al., 2009)
Add a description, image, and links to the mathematical-model topic page so that developers can more easily learn about it.
To associate your repository with the mathematical-model topic, visit your repo's landing page and select "manage topics."